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Location: light9/light9/rdfdb/rdflibpatch.py
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Ignore-this: a71a3e7f33dc4ba4c61592d805a8bc84
Ignore-this: a71a3e7f33dc4ba4c61592d805a8bc84
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 | """
this is a proposal for a ConjunctiveGraph method in rdflib
"""
import sys
if sys.path[0] == '/usr/lib/python2.7/dist-packages':
# nosetests puts this in
sys.path = sys.path[1:]
import unittest
from rdflib import ConjunctiveGraph, Graph, URIRef as U
def patchQuads(graph, deleteQuads, addQuads, perfect=False):
"""
Delete the sequence of given quads. Then add the given quads just
like addN would. If perfect is True, we'll error before the
deletes or before the adds (not a real transaction) if any of the
deletes isn't in the graph or if any of the adds was already in
the graph.
These input quads use URIRef for the context, but
Graph(identifier=) is also allowed (which is what you'll get
sometimes from rdflib APIs).
"""
toDelete = []
for spoc in deleteQuads:
spoc = fixContextToUri(spoc)
if perfect:
if inGraph(spoc, graph):
toDelete.append(spoc)
else:
raise ValueError("%r not in %r" % (spoc[:3], spoc[3]))
else:
graph.remove(spoc)
for spoc in toDelete:
graph.remove(spoc)
if perfect:
addQuads = list(addQuads)
for spoc in addQuads:
spoc = fixContextToUri(spoc)
if inGraph(spoc, graph):
raise ValueError("%r already in %r" % (spoc[:3], spoc[3]))
graph.addN(addQuads)
def fixContextToUri(spoc):
if not isinstance(spoc[3], U):
return spoc[:3] + (spoc[3].identifier,)
return spoc
def inGraph(spoc, graph):
"""
c is just a URIRef.
Workaround for https://github.com/RDFLib/rdflib/issues/398
"""
spoi = spoc[:3] + (Graph(identifier=spoc[3]),)
if spoi not in graph:
# this is a huge speedup, avoid many whole-graph scans
return False
return spoi in graph.quads()
# some of the following workarounds may be fixed in https://github.com/RDFLib/rdflib/issues/299
def graphFromQuads(q):
g = ConjunctiveGraph()
#g.addN(q) # no effect on nquad output
for s,p,o,c in q:
#g.get_context(c).add((s,p,o)) # kind of works with broken rdflib nquad serializer code; you need this for json_ld serialize to work :(
g.store.add((s,p,o), c) # no effect on nquad output
return g
def graphFromNQuad(text):
g1 = ConjunctiveGraph()
g1.parse(data=text, format='nquads')
return g1
from rdflib.plugins.serializers.nt import _xmlcharref_encode
def serializeQuad(g):
"""replacement for graph.serialize(format='nquads')"""
out = []
for s,p,o,c in g.quads((None,None,None)):
if isinstance(c, Graph):
# still not sure why this is Graph sometimes,
# already URIRef other times
c = c.identifier
if '[' in c.n3():
import ipdb;ipdb.set_trace()
out.append(u"%s %s %s %s .\n" % (s.n3(),
p.n3(),
_xmlcharref_encode(o.n3()),
c.n3()))
return ''.join(out)
def inContext(graph, newContext):
"""
make a ConjunctiveGraph where all the triples in the given graph
are now in newContext
"""
return graphFromQuads([(s,p,o,newContext) for s,p,o in graph])
def contextsForStatement(graph, triple):
return [q[3] for q in graph.quads(triple)]
A = U("http://a"); B = U("http://b")
class TestContextsForStatement(unittest.TestCase):
def testNotFound(self):
g = graphFromQuads([(A,A,A,A)])
self.assertEqual(contextsForStatement(g, (B,B,B)), [])
def testOneContext(self):
g = graphFromQuads([(A,A,A,A), (A,A,B,B)])
self.assertEqual(contextsForStatement(g, (A,A,A)), [A])
def testTwoContexts(self):
g = graphFromQuads([(A,A,A,A), (A,A,A,B)])
self.assertEqual(sorted(contextsForStatement(g, (A,A,A))), sorted([A,B]))
# There's a case where contextsForStatement was returning a Graph
# with identifier, which I've fixed without a test
class TestGraphFromQuads(unittest.TestCase):
nqOut = '<http://example.com/> <http://example.com/> <http://example.com/> <http://example.com/> .\n'
def testSerializes(self):
n = U("http://example.com/")
g = graphFromQuads([(n,n,n,n)])
out = serializeQuad(g)
self.assertEqual(out.strip(), self.nqOut.strip())
def testNquadParserSerializes(self):
g = graphFromNQuad(self.nqOut)
self.assertEqual(len(g), 1)
out = serializeQuad(g)
self.assertEqual(out.strip(), self.nqOut.strip())
A = U("http://a"); B = U("http://b"); C = U("http://c")
CTX1 = U('http://ctx1'); CTX2 = U('http://ctx2')
stmt1 = A, B, C, CTX1
stmt2 = A, B, C, CTX2
class TestPatchQuads(unittest.TestCase):
def testAddsToNewContext(self):
g = ConjunctiveGraph()
patchQuads(g, [], [stmt1])
self.assert_(len(g), 1)
quads = list(g.quads((None,None,None)))
self.assertEqual(quads, [(A, B, C, Graph(identifier=CTX1))])
def testDeletes(self):
g = ConjunctiveGraph()
patchQuads(g, [], [stmt1])
patchQuads(g, [stmt1], [])
quads = list(g.quads((None,None,None)))
self.assertEqual(quads, [])
def testDeleteRunsBeforeAdd(self):
g = ConjunctiveGraph()
patchQuads(g, [stmt1], [stmt1])
quads = list(g.quads((None,None,None)))
self.assertEqual(quads, [(A, B, C, Graph(identifier=CTX1))])
def testPerfectAddRejectsExistingStmt(self):
g = ConjunctiveGraph()
patchQuads(g, [], [stmt1])
self.assertRaises(ValueError, patchQuads, g, [], [stmt1], perfect=True)
def testPerfectAddAllowsExistingStmtInNewContext(self):
g = ConjunctiveGraph()
patchQuads(g, [], [stmt1])
patchQuads(g, [], [stmt2], perfect=True)
self.assertEqual(len(list(g.quads((None,None,None)))), 2)
def testPerfectDeleteRejectsAbsentStmt(self):
g = ConjunctiveGraph()
self.assertRaises(ValueError, patchQuads, g, [stmt1], [], perfect=True)
def testPerfectDeleteRejectsStmtFromOtherGraph(self):
g = ConjunctiveGraph()
patchQuads(g, [], [stmt2])
self.assertRaises(ValueError, patchQuads, g, [stmt1], [], perfect=True)
def testPerfectDeleteAllowsRemovalOfStmtInMultipleContexts(self):
g = ConjunctiveGraph()
patchQuads(g, [], [stmt1, stmt2])
patchQuads(g, [stmt1], [], perfect=True)
def testRedundantStmtOkForAddOrDelete(self):
g = ConjunctiveGraph()
patchQuads(g, [], [stmt1, stmt1], perfect=True)
patchQuads(g, [stmt1, stmt1], [], perfect=True)
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